Meet Incub8: a web application for accelerometer data visualization and analysis

We released an alpha version of a web application, that specializes in visualisation of behavioural data from various dataloggers (mainly bird incubation data) in a form of custom actogram plots. Furthermore, the application is able to predict hidden states based on logged environmental data, using Hidden Markov Models (HMM) and a set of recommended transformation and post-processing techniques that ensure that the data are stationary. For extremely long datasets, the application offers a useful “rarefy feature”, that lowers the sample size for crude and fast preliminary results. The application is available at https://bergfzp.shinyapps.io/incub8/, where you can also find the training datasets and complete documentation.

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